matplotlib - How to make a scatter plot for clustering in Python -


i carrying out clustering , try plot result. dummy data set :

data

import numpy np  x = np.random.randn(10) y = np.random.randn(10) cluster = np.array([0, 1, 1, 1, 3, 2, 2, 3, 0, 2])    # labels of cluster 0 3 

cluster center

 centers = np.random.randn(4, 2)    # 4 centers, each center 2d point 

question

i want make scatter plot show points in data , color points based on cluster labels.

then want superimpose center points on same scatter plot, in shape (e.g. 'x') , fifth color (as there 4 clusters).


comment

  • i turned seaborn 0.6.0 found no api accomplish task.
  • ggplot yhat made scatter plot nice second plot replace first one.
  • i got confused color , cmap in matplotlib wonder if use seaborn or ggplot it.

the first part of question can done using colorbar , specifying colours cluster array. have vaguely understood second part of question, believe looking for.

import numpy np import matplotlib.pyplot plt  x = np.random.randn(10) y = np.random.randn(10) cluster = np.array([0, 1, 1, 1, 3, 2, 2, 3, 0, 2])    # labels of cluster 0 3 centers = np.random.randn(4, 2)   fig = plt.figure() ax = fig.add_subplot(111) scatter = ax.scatter(x,y,c=cluster,s=50) i,j in centers:     ax.scatter(i,j,s=50,c='red',marker='+') ax.set_xlabel('x') ax.set_ylabel('y') plt.colorbar(scatter)  fig.show() 

which results in:

enter image description here

wherein "centres" have been shown using + marker. can specify colours want them in same way have done x , y


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